Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910309.1_cds_XP_016460366.1_53795
CDS Infomation

[gene=LOC107783854] [db_xref=GeneID:107783854] [protein=phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like] [protein_id=XP_016460366.1] [location=join(46401..46943,47569..47846,48592..48868,48982..49227,49709..49966)] [gbkey=CDS]
Sequence

ATGGCTCTTTCAACTAGCAGCGCCAACTCCCTCCTACCTAATATAGCCTTAATTCAAACT
CAACCTCTTTTACCTTCTCCCAAACATGCCCTTCCCACCAACTCAACCAAACCCGTTAGA
CCGATCTCAGCCGTCTATTCTCCCGACTCCTCCAAGACCCCTAAACCTTCGCCGCCGGCA
GCCACCTCCTCCACTGCTGCTGCTGTCACGGGGAAAAAAACAGACCAAGTTTCTAAAAAA
TGGTCAGTTGACAGCTGGAGATCGAAGAAAGCACTTCAGCTTCCAGAGTACCCGAATAAA
GATGATCTTGAATCAGTTCTTAAGACCATTGAAGATTTCCCTCCAATTGTGTTTGCTGGT
GAGGCGAGGAGTCTTGAAGAGCGACTTGGAGAGGCTGCAATGGGGAAGGCGTTTCTGCTA
CAAGGTGGTGACTGTGCCGAGAGTTTCAAGGAATTCAATGCTGTTAACATAAGGGACACT
TTCAGAATCATCCTTCAAATGGGTGCTGTTCTTATGTTCGGTGGTCAGATGCCCGTTGTC
AAGGTTGGAAGAATGGCTGGGCAATTTGCAAAGCCAAGATCAGACTCATTTGAAGAGAAA
GATGGAGTAAAGCTGCCAAGTTACAGGGGAGATAATGTGAATGGAGATGCATTTGATGAA
AAATCCAGAATTCCGGATCCTCAAAGGATGATCAGGGCCTATTGTCAATCTGCAGCTACT
TTGAATCTCTTGAGGGCCTTTGCTAAAGGAGGATATGCTGCTATGCAGAGGATCAACCAA
TGGAACTTAGATTTTACAGAGCACAGCGAGCAGGGTGATCGGTATCGTGAATTAGCTCAT
AGAGTGGATGAGGCCCTTGGTTTCATGGCTGCTGCTGGACTTACAACGGACCATCCTATC
ATGAAAACCACGGAGTTTTGGACGTCTCACGAGTGCTTACTTTTGCCGTATGAGCAGTCA
CTTACAAGATTGGATTCAACTTCTGGCCTTTACTATGATTGCTCTGCCCATTTTCTTTGG
GCTGGGGAGAGAACCAGACAATTGGATGGTGCCCATGTTGAGTTCTTGAGAGGAATTGCC
AACCCCCTTGGTATAAAGGTGAGTGACAAGATGGATCCAAATGAGTTAGTTAAGCTCATT
GACATTCTGAACCCTAACAACAAACCAGGAAGGATTACAATAATTACCAGAATGGGAGCA
GAGAACATGAGGGTTAAGCTTCCTCATCTAATAAGGGCAGTGAGAAGAGCTGGGCAAATT
GTTACATGGGTATCTGATCCTATGCATGGAAATACCATTAAAGCACCTTGTGGTCTGAAA
ACTCGACCTTTTGATTCCATCAGGGCTGAAGTGAGAGCATTCTTTGACGTGCATGAGCAA
GAAGGAAGCCATCCAGGAGGAGTTCACCTAGAGATGACAGGCCAAAATGTAACAGAGTGC
ATTGGTGGATCAAGGACCGTGACTTTCGATGATCTGAGCTCACGCTATCACACCCACTGC
GATCCTAGACTCAATGCATCTCAATCCCTTGAACTCGCCTTTATTATCGCTGAACGCCTC
AGAAAGAGGAGGCTTGGATCTCAAAGCTCATTAAGTTACTAA

Peptide Sequence

PEP ID

XP_016460366.1
PEP Infomation

PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MALSTSSANSLLPNIALIQTQPLLPSPKHALPTNSTKPVRPISAVYSPDSSKTPKPSPPA
ATSSTAAAVTGKKTDQVSKKWSVDSWRSKKALQLPEYPNKDDLESVLKTIEDFPPIVFAG
EARSLEERLGEAAMGKAFLLQGGDCAESFKEFNAVNIRDTFRIILQMGAVLMFGGQMPVV
KVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDEKSRIPDPQRMIRAYCQSAAT
LNLLRAFAKGGYAAMQRINQWNLDFTEHSEQGDRYRELAHRVDEALGFMAAAGLTTDHPI
MKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWAGERTRQLDGAHVEFLRGIA
NPLGIKVSDKMDPNELVKLIDILNPNNKPGRITIITRMGAENMRVKLPHLIRAVRRAGQI
VTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTEC
IGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRLGSQSSLSY

Transcript Sequence

Gene sequence data has not been registered.